References

1990

S. R. Arridge, P. van der Zee, M. Cope, D. T. Delpy, New results for the development of infra-red absorption imaging, Proc. SPIE 1245, 92-103 (1990).

1991

S. R. Arridge, P. van der Zee, M. Cope and D. T. Delpy, Reconstruction methods for infra-red absorption imaging, Proc. SPIE 1431, 204-215 (1991).

1992

S. R. Arridge, M. Cope and D. T. Delpy, The theoretical basis for the determination of optical pathlengths in tissue: temporal and frequency analysis, Phys. Med. Biol. 37(7), 1531-1560 (1992). [Link]

S. R. Arridge, M. Schweiger and D. T. Delpy, Iterative reconstruction of near infra-red absorption images, Proc. SPIE 1767, 372-383 (1992). [Link]

S. R. Arridge, P. van der Zee, D. T. Delpy and M. Cope, Aspects of clinical infrared absorption imaging, in: The Formation, Handling and Evaluation of Medical Images, edited by A. T. Pokropek and M. A. Viergever, NATO ASI Series F 98, 407-418 (Springer, Heidelberg, 1992).

M. Schweiger, S. R. Arridge, M. Hiraoka and D. T. Delpy, Application of the finite element method for the forward model in infrared absorption imaging, Proc. SPIE 1768, 97-108 (1992). [Link]

1993

S. R. Arridge, M. Schweiger, M. Hiraoka and D. T. Delpy, Performance of an iterative reconstruction algorithm for near infrared absorption and scatter imaging, Proc. SPIE 1888, 360-371 (1993). [Link]

S. R. Arridge and M. Schweiger, Use of multiple data types in time-resolved optical absorption and scattering tomography (TOAST), Proc. SPIE 2035, 218-229 (1993). [Link]

S. R. Arridge, M. Schweiger, M. Hiraoka and D. T. Delpy, A finite element approach for modeling photon transport in tissue, Med. Phys. 20(2), 299-309 (1993). [Link]

S. R. Arridge, The forward and inverse problems in time-resolved infrared imaging, in: Medical Optical Tomography: Functional Imaging and Monitoring, edited by G. Müller et al. (SPIE, Bellingham, WA, 1993), 35-64.

S.R. Arridge, Inverse methods for optical tomography, in: Information Processing in Medical Imaging '93, edited by H. H. Barrett and A. F. Gmitro (Springer, Berlin, 1993), 259-277. [Link]

M. Schweiger, S. R. Arridge, M. Hiraoka, M. Firbank, D. T. Delpy, Comparison of a finite element forward model with experimental phantom results: application to image reconstruction, Proc. SPIE 1888, 179-190 (1993). [PDF] [Link]

M. Schweiger, S. R. Arridge and D. T. Delpy, Application of the finite element method for the forward and inverse models in optical tomography, J. Math. Imag. Vision 3, 263-283 (1993). [Link]

1994

M. Schweiger, Application of the finite element method in infrared image reconstruction of scattering media, PhD thesis, University of London (1994). [PDF]

1995

S. R. Arridge and M. Schweiger, Sensitivity to prior knowledge in optical tomographic reconstruction, Proc. SPIE. 2389, 378-388 (1995). [Link]

S. R. Arridge and M. Hiraoka and M. Schweiger, Modeling of noise for near-infrared transillumination imaging, Proc. SPIE. 2389, 389-399 (1995). [Link]

S. R. Arridge and M. Schweiger, Direct calculation of the moments of the distribution of photon time of flight in tissue with a finite element method, Appl. Opt. 34(15), 2683-2687 (1995). [Link] [PDF]

S. R. Arridge, Photon measurement density functions. Part 1: Analytical forms, Appl. Opt. 34(31), 7395-7409 (1995). [Link]

S. R. Arridge and M. Schweiger, Photon measurement density functions. Part 2: Finite element calculations, Appl. Opt. 34(34), 8026-8037, (1995). [Link]

S. R. Arridge and M. Hiraoka and M. Schweiger, Statistical basis for the determination of optical pathlength in tissue, Phys. Med. Biol. 40, 1539-1558 (1995). [Link]

S. R. Arridge and M. Schweiger, Reconstruction in optical tomography using MRI based prior knowledge, in: Information Processing in Medical Imaging '95, edited by Y. Bizais, C. Barillot and R. di Paola (Springer, Berlin, 77-88 (1995).

E. Okada, M. Firbank, M. Schweiger, S. R. Arridge, M. Cope and D. T. Delpy, Theoretical and experimental investigation of the effect of sulci on light propagation in brain tissue, Proc. SPIE 2626 (1995). [Link]

M. Schweiger and S. R. Arridge, Near infrared imaging: Photon measurement density functions, Proc. SPIE 2389, 366-377 (1995). [Link]

M. Schweiger, S. R. Arridge, M. Hiraoka and D. T. Delpy, The finite element model for the propagation of light in scattering media: Boundary and source conditions, Med. Phys. 22(11), 1779-1792 (1995). [Link]

1996

M. Firbank, S. R. Arridge, M. Schweiger and D. T. Delpy, An investigation of light transport through scattering bodies with non-scattering regions, Phys. Med. Biol. 41(4), 767-783 (1996). [Link]

E. Okada, M. Schweiger, S. R. Arridge, M. Firbank and D. T. Delpy, Experimental validation of Monte-Carlo and finite-element methods for the estimation of the optical path length in inhomogeneous tissue, Appl. Opt. 35(19), 3362- (1996). [Link]

M. Schweiger, A system for solving the forward and inverse problems in optical spectroscopy and imaging, OSA, TOPS (Trends in Optics & Photonics) Vol. 2, 1996.

1997

S. R. Arridge and J. C. Hebden, Optical imaging in medicine: II. Modelling and reconstruction, Phys. Med. Biol. 42(5), 841-853 (1997). [Link]

J. C. Hebden, S. R. Arridge and D. T. Delpy, Optical imaging in medicine: I. Experimental techniques, Phys. Med. Biol. 42(5), 825-840 (1997). [Link]

E. Okada, M. Firbank, M. Schweiger, S. R. Arridge, M. Cope and D. T. Delpy, Theoretical and experimental investigation of near-infrared light propagation in a model of the adult head, Appl. Opt. 36(1), 21-31 (1997) [Link]

M. Schweiger and S. R. Arridge, Optimal data types in optical tomography, in: Information Processing in Medical Imaging (IPMI'97), Lecture Notes in Computer Science, vol 1230, pp. 71-84, Springer (1997). [Link]

M. Schweiger and S. R. Arridge, The finite element method for the propagation of light in scattering media: Frequency domain case, Med. Phys. 24(6), 895-902 (1997). [Link] [PDF]

M. Schweiger and S. R. Arridge, Direct calculation with a finite-element method of the Laplace transform of the distribution of photon time of flight in tissue, Appl. Opt. 36(34), 9042-9049 (1997). [PDF] [Link]

1998

S. R. Arridge and M. Schweiger, A gradient-based optimisation scheme for optical tomography, Optics Express 2(6), 213-226 (1998). [Link]

S. R. Arridge and M. Schweiger, A general framework for iterative reconstruction algorithms in optical tomography, using a finite element method, in: Computational Radiology and Imaging: Therapy and Diagnosis, IMA Volumes in Mathematics and its Applications, vol. 110, 45-70 (Springer, 1999). [Link]

S. R. Arridge and W. R. B. Lionheart, Non-uniqueness in diffusion-based optical tomography, Opt. Lett. 23(11), 882-884 (1998). [Link]

J. C. Hebden, S. R. Arridge and M. Schweiger, Investigation of alternative data types for time-resolved optical tomography, in Advances in Optical Imaging and Photon Migration, J. Fujimoto and M. Patterson, eds., Vol. 21 of OSA Trends in Optics and Photonics (Optical Society of America, 1998), paper ATuC1. [Link]

M. Schweiger and S. R. Arridge, Comparison of two- and three-dimensional reconstruction methods in optical tomography, Appl. Opt. 37, 7419-7428 (1998). [PDF] [Link]

1999

S. R. Arridge, Optical tomography in medical imaging, Inverse Problems 15(2), R41-R93 (1999). [Link]

H. C. Hebden, F. E. W. Schmidt, M. E. Fry, M. Schweiger, E. M. C. Hillman, D. T. Delpy and S. R. Arridge, Simultaneous reconstruction of absorption and scattering images by multichannel measurement of purely temporal data, Opt. Lett. 24(8), 534-536 (1999). [Link]

J. C. Hebden, F. E. W. Schmidt, M. E. Fry, E. M. C. Hillman, M. Schweiger and D. T. Delpy, Imaging of tissue-equivalent phantoms using the UCL multi-channel time-resolved instrument, in Biomedical Optics, OSA Technical Digest (Optical Society of America, 1999), paper AMC4. [Link]

W. R. B. Lionheart, S. R. Arridge, M. Schweiger, M. Vauhkonen and J. P. Kaipio, Electrical impedance and diffuse optical tomography reconstruction software, Proc. 1st World Congr. on Industrial Process Tomography, 474-477 (1999). [PDF]

M. Schweiger, L. Zhukov, S. R. Arridge and C. Johnson, Optical tomography using the SCIRun problem solving environment: Preliminary results for three-dimensional geometries and parallel processing, Optics Express 4(8), 263-269 (1999). [Link]

M. Schweiger and S. R. Arridge, Application of temporal filters to time resolved data in optical tomography, Phys. Med. Biol. 44(7), 1699-1717 (1999). [Link] [PDF]

M. Schweiger and S. R. Arridge, Optical tomographic reconstruction in a complex head model using a priori region boundary information, Phys. Med. Biol. 44(11), 2703-2721 (1999). [Link] [PDF]

2000

S. R. Arridge, H. Dehghani, M. Schweiger and E. Okada, The finite element model for the propagation of light in scattering media: A direct method for domains with nonscattering regions, Med. Phys. 27(1), 252-264 (2000). [Link]

H. Dehghani, S. R. Arridge, M. Schweiger and D. T. Delpy, Optical tomography in the presence of void regions, J. Opt. Soc. Am. A 17, 1659-1670 (2000). [Link]

H. Dehghani, S. R. Arridge, M. Schweiger and D. T. Delpy, Image reconstruction in the presence of void regions, in Biomedical Optical Spectroscopy and Diagnostics, T. Li, ed., Vol. 38 of OSA Trends in Optics and Photonics (Optical Society of America, 2000), paper TuC6. [Link]

E. M. C. Hillman, J. C. Hebden, F. E. Schmidt, S. R. Arridge, M. E. Fry, M. Schweiger and D. T. Delpy, Initial clinical testing of the UCL 32 channel time-resolved instrument for optical tomography, in Biomedical Optical Spectroscopy and Diagnostics, T. Li, ed., Vol. 38 of OSA Trends in Optics and Photonics (Optical Society of America, 2000), paper SuF5. [Link]

E. M. C. Hillman, J. C. Hebden, F. E. W. Schmidt, S. R. Arridge, M. Schweiger, H. Dehghani and D. T. Delpy, Calibration techniques and datatype extraction for time-resolved optical tomography, Rev. Sci. Instrum. 71, 3415 (2000). [Link]

J. Riley, H. Dehghani, M. Schweiger, S. Arridge, J. Ripoll and M. Nieto-Vesperinas, 3D optical tomography in the presence of void regions, Opt. Express 7, 462-467 (2000). [Link]

F. E. W. Schmidt, J. C. Hebden, E. M. C. Hillman, M. E. Fry, M. Schweiger, H. Deghani, D. T. Delpy and S. R. Arridge, Multiple-slice imaging of a tissue-equivalent phantom by use of time-resolved optical tomography, Appl. Opt. 39(19), 3380-3387 (2000). [Link] [PDF]

M. Schweiger and S. R. Arridge, Fast 3-D reconstruction in optical tomography using a coarse-grain parallelisation strategy, Proc. SPIE 4250, 93-100 (2001). [PDF] [Link]

2001

H. Dehghani, E. M. C. Hillman, M. Schweiger, S. R. Arridge and D. T. Delpy, Optical tomography of a 3D multilayered head model, Proc. SPIE 4250 (2001). [Link]

J. C. Hebden, H. Veenstra, H. Deghani, E. M. C. Hillman, M. Schweiger, S. R. Arridge and D. T. Delpy, Three-dimensional time-resolved optical tomography of a conical breast phantom, Appl. Opt. 40(19), 3278-3287 (2001) [Link]

E. M. C. Hillman, H. Dehghani, J. C. Hebden, S. R. Arridge, M. Schweiger and D. T. Delpy, Differential imaging in heterogeneous media: limitations of linearization assumptions in optical tomography, Proc. SPIE 4250 (2001). [Link] [PDF]

E. M. C. Hillman, J. C. Hebden, M. Schweiger, H. Dehghani, F. E. W. Schmidt, D. T. Delpy and S. R. Arridge, Time resolved optical tomography of the human forearm, Phys. Med. Biol. 46(4), 1117-1130 (2001). [Link] [PDF]

J. D. Riley, S. R. Arridge, Y. Chrysanthou, H. Dehghani, E. M. C. Hillman and M. Schweiger, Radiosity diffusion model in 3D, Proc. SPIE 4431 (2001). [Link]

2002

A. Gibson, H. Dehghani, R. M. Yusof, E. M. Hillman, J. C. Hebden, M. Schweiger, S. R. Arridge and D. T. Delpy, Optical tomography of a realistic head-shaped phantom, in Biomedical Topical Meeting, (Optical Society of America, 2002), paper WA2. [Link]

2003

A. Corlu, T. Durduran, R. Choe, M. Schweiger, E. M. C. Hillman, S. R. Arridge and A. G. Yodh, Uniqueness and wavelength optimization in continuous-wave multispectral diffuse optical tomography, Opt. Lett. 28(23), 2339-2341 (2003). [Link]

A. Gibson, R. M. Yusof, H. Dehghani, J. Riley, N. Everdell, R. Richards, J. C. Hebden, M. Schweiger, S. R. Arridge and D. T. Delpy, Optical tomography of a realistic neonatal head phantom, Appl. Opt. 42(16), 3109-3116 (2003). [Link] [PDF]

A. Gibson, J. Riley, M. Schweiger, J. C. Hebden, S. R. Arridge and D. T. Delpy, A method for generating patient-specific finite element meshes for head modelling, Phys. Med. Biol. 48(4), (2003). [Link] [PDF]

M. Schweiger and S. R. Arridge, Image reconstruction in optical tomography using local basis functions, J. Elec. Imaging, 12(4), 583-593 (2003). [Link]

M. Schweiger, A. Gibson and S. R. Arridge, Computational aspects of diffuse optical tomography, Computing in Science and Engineering, 5(6), 33-41 (2003). [Link] [PDF]

2005

W. Becker, A. Bergmann, A. Gibson, N. Everdell, D. Jennions, M. Schweiger, S. R. Arridge and J. Hebden, Multi-dimensional time-correlated single photon counting applied to diffuse optical tomography, Proc. SPIE 5693, 34 (2005). [Link] [PDF]

A. Corlu, R. Choe, T. Durduran, K. Lee, M. Schweiger, S. R. Arridge, E. M. C. Hillman and A. G. Yodh, Diffuse optical tomography with spectral constraints and wavelength optimization, Appl. Opt. 44(11), 2082-2093 (2005). [Link] [PDF]

A. Douiri, M. Schweiger, J. Riley, S. R. Arridge, An adaptive diffusion regularization method of inverse problem for diffuse optical tomography, Proc. SPIE 5859 (2005) [Link]

A. Douiri, M. Schweiger, J. Riley and S. Arridge, Local diffusion regularization method for optical tomography reconstruction by using robust statistics, Opt. Lett. 30, 2439-2441 (2005). [Link] [PDF]

R. Elaloufi and S. R. Arridge, Modelling the influence of interfaces and multiple layers on light propagation in a slab geometry with the radiative transport equation, Proc. SPIE 5859 (2005). [Link]

A. P. Gibson, J. C. Hebden, J. Riley, N. Everdell, M. Schweiger, S. R. Arridge and D. T. Delpy, Linear and nonlinear reconstruction for optical tomography of phantoms with nonscattering regions, Appl. Opt. 44(19), 3925-3936 (2005). [Link]

A. P. Gibson, T. Austin, N. Everdell, J. H. Meek, J. S. Wyatt, M. Schweiger, S. R. Arridge, D. T. Delpy and J. C. Hebden, 3D optical tomography of the neonatal brain, Proc. SPIE 5859 (2005). [Link]

I. Nisslilä, T. Noponen, K. Kotilahti, T. Katila, L. Lipi#228;inen, T. Tarvainen, M. Schweiger and S. R. Arridge, Instrumentation and calibration methods for the multichannel measurement of phase and amplitude in optical tomography, Rev. Sci. Instrum. 76(4), 044302 (2005). [Link]

M. Schweiger, S. R. Arridge and I. Nissila, Gauss-Newton method for image reconstruction in diffuse optical tomography, Phys. Med. Biol. 50, 2365-2386 (2005). [Link] [PDF]

M. Schweiger, O. Camara-Rey, W. R. Crum, E. Lewis, J. Schnabel, S. R. Arridge, D. L. G. Hill and N. Fox, An inverse problem approach to the estimation of volume change, Proc. MICCAI, 616-623 (2005). [Link]

T. Tarvainen, V. Kolehmainen, M. Vauhkonen, A. Vanne, A. P. Gibson, M. Schweiger, S. R. Arridge and J. P. Kaipio, Computational calibration method for optical tomography, Appl. Opt. 44(10), 1879-1888 (2005). [Link]

S. Wright, M. Schweiger and S. R. Arridge, Solutions to the transport equation using variable order angular basis, Proc. SPIE 5859 (2005). [Link]

2006

S. R. Arridge, J. P. Kaipio, V. Kolehmainen, M. Schweiger, E. Somersalo, T. Tarvainen and M. Vauhkonen, Approximation errors and model reduction with an application in optical diffusion tomography, Inverse Problems 22(1), 175-195 (2006). [Link] [PDF]

S. R. Arridge, O. Dorn, J. P. Kaipio, V. Kolehmainen, M. Schweiger, T. Tarvainen, M. Vauhkonen and A. Zacharopoulos, Reconstruction of subdomain boundaries of piecewise constant coefficients of the radiative transfer equation from optical tomography data, Inverse Problems 22, 2175-2196 (2006). [Link] [PDF]

A. Corlu, T. Durduran, R. Choe, K. Lee, M. Schweiger, S. R. Arridge and A. G. Yodh, White Light Diffuse Optical Tomography and Validation of Optimum Wavelengths for CW DOT, in Biomedical Optics, Technical Digest, OSA (2006). [Link]

A. P. Gibson, N. L. Everdell, J. C. Hebden, T. Austin, F. Wong, J. H. Meek, J. S. Wyatt, M. Schweiger and S. R. Arridge, Anatomically Constrained Optical Tomography of the Neonatal Brain, in Biomedical Optics, OSA Technical Digest (2006) [Link]

A. P. Gibson, T. Austin, N. L. Everdell, M. Schweiger, S. R. Arridge, J. H. Meek, J. S. Wyatt, D. T. Delpy and J. C. Hebden, Three-dimensional whole-head optical tomography of passive motor evoked responses in the neonate, NeuroImage 30(2), 521-528 (2006). [Link]

I. T. Nissila, J. C. Hebden, D. Jennions, J. Heino, M. Schweiger, K. M. Kotilahti, T. E. Noponen, A. P. Gibson, S. Jaervenpaeae, L. Lipiainen and T. E. Katila, Comparison between a time-domain and a frequency-domain system for optical tomography, J. Biomed. Opt. 11(06) (2006). [Link]

A. R. Pineda, M. Schweiger, S. R. Arridge and H. H. Barrett, Information content of data types in time-domain optical tomography, J. Opt. Soc. Am. A 23, 2989-2996 (2006). [Link]

M. Schweiger, S. R. Arridge, O. Dorn, A. Zacharopoulos and V. Kolehmainen, Reconstructing absorption and diffusion shape profiles in optical tomography by a level set technique, Opt. Lett. 21(4), 471-473 (2006). [Link]

J. Sikora, A. Zacharopoulos, A. Douiri, M. Schweiger, L. Horesh, S. R. Arridge and J. Ripoll, Diffuse photon propagation in multilayered geometries, Phys. Med. Biol. 51(3), 497-516 (2006). [Link]

L. Horesh, M. Schweiger, M. Bollhöfer, A. Douiri, S. R. Arridge and D. S. Holder, Multilevel preconditioning for 3D large-scale soft field medical applications modelling. Information and Systems Sciences, Special Issue on Computational Aspects of Soft Field Tomography, 532-556 (2006). [PDF]

T. Austin, A. P. Gibson, G. Branco, R. Yusof, S. R. Arridge, J. H. Meek, J. S. Wyatt, D. T. Delpy and J. C. Hebden, Three-dimensional optical imaging of blood volume and oxygenation in the preterm brain, Neuroimage, 31, 1426-1433 (2006).

2007

A. Corlu, R. Choe, T. Durduran, M. A. Rosen, M. Schweiger, S. R. Arridge, M. D. Schnall and A. G. Yodh, Three-dimensional in vivo fluorescence diffuse optical tomography of breast cancer in humans, Opt. Express 15, 6696-6716 (2007). [Link]

A. Douiri, M. Schweiger, J. Riley and S. R. Arridge, Anisotropic diffusion regularization methods for diffuse optical tomography using edge prior information, Meas. Sci. Technol. 18(1), 87-95 (2007). [Link]

L. C. Enfield, A. P. Gibson, N. L. Everdell, D. T. Delpy, M. Schweiger, S. R. Arridge, C. Richardson, M. Keshtgar, M. Douek and J. C. Hebden, Three-dimensional time-resolved optical mammography of the uncompressed breast, Appl. Opt. 46, 3628-3638 (2007). [Link]

R. B. Schulz, M. Schweiger, C. D'Andrea, G. Valentini, J. Peter, R. Cubeddu, S. Arridge and W. Semmler, Applying time-dependent data for fluorescence tomography, Proc. SPIE 6626 (2007). [Link]

M. Schweiger, I. Nissila, D. A. Boas and S. R. Arridge, Image reconstruction in optical tomography in the presence of coupling errors, Appl. Opt. 46(14), 2743-2756 (2007). [Link]

S. Wright, M. Schweiger and S. R. Arridge, Reconstruction in optical tomography using the P_N approximations, Meas. Sci. Technol. 18(1), 79-86 (2007). [Link]

V.Y. Soloviev, K.B. Tahir, J. McGinty, D.S. Elson, M. A. A. Neil, P. M. W. French and S.R. Arridge, Fluorescence lifetime imaging by using time gated data acquisition, Applied Optics, 46, 7384-7391 (2007). [Link]

V.Y. Soloviev, J. McGinty, K.B. Tahir, M.A.A. Neil, A. Sardini, J.V. Hajnal, S. R. Arridge and P. M. W. French, Fluorescence lifetime tomography of live cells expressing enhanced green fluorescent protein embedded in a scattering medium exhibiting background autofluorescence, Optics Letters 32, 2034-2036 (2007). [Link]

B. T. Cox, S. R. Arridge and P. C. Beard, K-space propagation models for acoustically heterogeneous media: application to biomedical photoacoustics, Journal of the Acoustical Society of America 121, 3453-3464 (2007). [Link]

2008

A. P. Gibson, L. C. Enfield, M. Schweiger, S. R. Arridge, M. Douek and J. C. Hebden, 3-D Optical Mammography of the Uncompressed Breast, in Biomedical Optics, OSA Technical Digest (2008). [Link]

P. Svenmkarker, J. Axelsson, M. Schweiger, A. Zacharopoulos, S. R. Arridge and S. Andersson-Engels, Multispectral Fluorescence Enhanced Diffuse Optical Tomography Evaluated with Weight Matrix Free Algorithm, in Biomedical Optics, OSA Technical Digest (2008). [Link]

M. Schweiger, O. Dorn and S. R. Arridge, 3-D shape and contrast reconstruction in optical tomography with level sets, in Applied Inverse Problems 2007: Theoretical and Computational Aspects, J. Phys.: Conf. Ser. 124, paper 012043 (2008). [Link] [PDF]

S. R. Arridge, O. Dorn, V. Kolehmainen, M. Schweiger and A. Zacharopoulos, Parameter and structure reconstruction in optical tomography, in 6th International Conference on Inverse Problems in Engineering: Theory and Practice, J. Phys.: Conf. Ser. 135, paper 012001 (2008). [Link] [PDF]

V.Y. Soloviev, C. D'Andrea, M. Brambilla, G. Valentini, R. B. Schulz, R. Cubeddu and S.R. Arridge, Adjoint time domain method for fluorescent imaging in turbid media, Applied Optics, 47(13), 2303--2311 (2008). [Link]

A. Bassi, C. D'Andrea, G. Valentini, R. Cubeddu and S.R. Arridge, Temporal propagation of spatial information in turbid media, Optics Letters, 33(23) 2836-2838 (2008). [Link]

T. Tarvainen, M. Vaukhonen and S.R.Arridge, Gauss-Newton reconstruction method for optical tomography using the finite element solution of the radiative transfer equation, Journal of Quantitative Spectroscopy and Radiative Transfer, 109, 2767-2778 (2008). [Link]

P. Chinchapatnam, K. Rhode, M. Ginks, A. King, G. Gao, Y. Ma, T. Schaeffter, C. A. Rinaldi, P. Lambiase, D. Hawkes, R. Razavi, D. Hill, S.Arridge and M. Sermesant, Model-based Imaging of Cardiac Local Conductivity for Diagnosis and Planning of Therapy, IEEE Trans. Med. Imaging, 27(11) 289-301 (2008). [Link]

2009

V.Y. Soloviev, C. D'Andrea, G. Valentini, R. Cubeddu and S.R. Arridge, Combined reconstruction of fluorescent and optical parameters using time resolved data, Applied Optics, 48, 28-36 (2009). [Link]

R. Choe, S.D. Konecky, A. Corlu, K. Lee, T. Durduran, D. Busch, S. Pathak, B.J. Czerniecki, J. Tchou, D. L. Fraker, A. DeMichele, B. Chance, S. R. Arridge, M. J. Schweiger, M. D. Schnall, M. E. Putt, M.A. Rosen and A.G. Yodh, Differentiation of Benign and Malignant Breast Tumor by in-vivo Parallel-Plate Diffuse Optical Tomography, J. Biomedical Optics, 14(2) (2009).

B. T. Cox, S. R. Arridge and P. C. Beard, Estimating chromophore distributions from multiwavelength photoacoustic images, J. Opt. Soc. Am. A, 26(2), 443-445 (2009). [Link]

A. Bassi, C. D'Andrea, G. Valentini, R. Cubeddu and S.R. Arridge, Detection of inhomogeneities in diffusive media using spatially modulated light, Optics Letters 34(14), 2156-2158 (2009). [Link]

J. McGinty, V. Y. Soloviev, K. B. Tahir, R. Laine, D. W. Stuckey, J. V. Hajnal, A. Sardini, P. M. W. French and S. R. Arridge, Three-dimensional imaging of Forster resonance energy transfer in heterogeneous turbid media by tomographic fluorescent lifetime imaging, Optics Letters, 34(18), 2772-2774 (2009). [Link]

C. Panagiotou, S. Somayajula, A. P. Gibson, M. Schweiger, R. M. Leahy and S. R. Arridge, Information Theoretic Regularization in Diffuse Optical Tomography, J. Opt. Soc. Am. A, 26(5), 1277-1290 (2009). [Link]

V. Kolehmainen, M. Schweiger, I.Nissili, T. Tarvainen, S. R. Arridge, J. P. Kaipio, Approximation Errors and Model Reduction in Diffuse Optical Tomography, J. Opt. Soc. Am. A, 26(10), 2257-2268 (2009). [Link]

P. Hiltunen, S. Prince, S. R. Arridge, A combined reconstruction-classification method for diffuse optical tomography, Phys. Med. Biol., 54, 6457-6476 (2009). [Link]

A. D. Zacharopoulos, M. Schweiger, V. Kolehmainen, S.R. Arridge, 3D shape based reconstruction of experimental data in Diffuse Optical Tomography, Optics Express, 17(21), 18940-18956 (2009). [Link]

S. R. Arridge, J. C. Schotland, Optical Tomography: forward and inverse problems, Inverse Problems, 25(12), 123010 (2009). [Link]

T. Correia, A. P. Gibson, M. Schweiger, J. C. Hebden, Selection of regularization parameter for optical topography, J. Biomed. Opt. 14, 034044 (2009) [PDF]

2010

M. Schweiger, O. Dorn, A. Zacharopoulos, I. Nissila and S. R. Arridge, 3D level set reconstruction of model and experimental data in Diffuse Optical Tomography, Optics Express 18(1), 150-164 (2010). [Link]

T. Tarvainen, V. Kolehmainen, A. Pulkkinen, M. Vauhkonen, M. Schweiger, S. R. Arridge, J. P. Kaipio, An approximation error approach for compensating for modelling errors between the radiative transfer equation and the diffusion approximation in diffuse optical tomography, Inverse Problems 26(1) 015005 (2010). [Link]

J. P. Elisee, A. Gibson, S. Arridge, Combination of boundary element method and finite element method in diffuse optical tomography, IEEE Trans. Biomed. Eng. 57(11), 2737-2745 (2010) [Link]

T. Correia, A. P. Gibson, J. C. Hebden, Identification of the optimal wavelengths for optical topography: a photon measurement density function analysis, J. Biomed. Opt. 15, 056002 (2010) [Link]

C. D'Andrea, N. Ducros, A. Bassi, S.R. Arridge, G. Valentini, Fast 3D optical reconstruction in turbid media using spatially modulated light, Biomed Opt Express 1(2), 471-481 (2010) [Link]

N. Ducros, C. D'andrea, G. Valentini, T. Rudge, S.R. Arridge, A. Bassi, Full-wavelet approach for fluorescence diffuse optical tomography with structured illumination, Opt Lett 35(21), 3676-3678 (2010) [Link]

2011

P. S. Mohan, T. Tarvainen, M. Schweiger, A. Pulkkinen, S. R. Arridge, Variable order spherical harmonic expansion scheme for the radiative transport equation using finite elements, J. Comp. Phys. 230(19), 7364-7383 (2011) [Link]

P. S. Mohan, V. Y. Soloviev, S. R. Arridge, Discontinuous Galerkin method for the forward modelling in optical diffusion tomography, Int. J. Numer. Meth. Eng. 85(5), 562-574 (2011) [Link]

M. Schweiger, GPU-Accelerated Finite Element Method for Modelling Light Transport in Diffuse Optical Tomography, International Journal of Biomedical Imaging, vol. 2011, Article ID 403892, 11 pages (2011). doi:10.1155/2011/403892 [Link]

J. Elisee, A. P. Gibson, S. R. Arridge, Diffuse optical cortical mapping using the boundary element method, Biomed. Opt. Express 2, 568-578 (2011) [Link]

T. Correia, J. Aguirre, A. Sisniega, J. Chamorro-Servent, J. Abascal, J. J. Vaquero, M. Desco, V. Kolehmainen, S. Arridge, Split operator method for fluorescence diffuse optical tomography using anisotropic diffusion regularisation with prior anatomical information, Biomed. Opt. Express 2, 2632-2648 (2011) [Link]

N. Ducros, A. Bassi, G. Valentini, M. Schweiger, S.R. Arridge, C. D'Andrea, Multiple-view fluorescence optical tomography reconstruction using compression of experimental data, Opt Lett 36(8), 1377-1379 (2011) [Link]

J. F. P. J. Abascal, W. R. B. Lionheart, S. R. Arridge, M. Schweiger, D. Atkinson, D. S. Holder, Electrical impedence tomography in anisotropic media with known eigenvectors, Inverse Problems 27(6), 065004, doi:10.1088/0266-5611/27/6/065004 [Link]

2012

T. Correia, S. Lloyd-Fox, N. Everdell, A. Blasi, C. Elwell, J. C. Hebden, A. P. Gibson, Three-dimensional optical topography of brain activity in infants watching videos of human movement, Phys Med Biol 57(5) 1135-1146 (2012)

N. Ducros, C. D'Andrea, A. Bassi, G. Valentini, S. R. Arridge, Virtual source pattern method for fluorescence tomography with structured light, Phys. Med. Biol. 57(12), 3811-3832 (2012) [Link]

J. F. Abascal, J. Aguirre, J. Chamorro-Servent, M. Schweiger, S. Arridge, J. Ripoll, J. J. Vaquero, M. Desco, Influence of absorption and scattering on the quantification of fluorescence diffuse optical tomography using normalized data, J. Biomed. Opt. 17(3), 036013 (2012) doi:10.1117/1.JBO.17.3.036103 [Link]

2013

N. Ducros, A. Bassi, G. Valentini, G. Canti, S. R. Arridge, C. D'Andrea, Fluorescence molecular tomography of an animal model using structured light rotating view acquisition, J Biomed Opt 18(2), 020503 (2013) [Link]

2014