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dtmx

Section: User Commands (1)
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NAME

dtmx - Creates a linear transform for fitting the diffusion tensor.

SYNOPSIS

dtmx -schemefile <scheme file>

DESCRIPTION

Creates a matrix file for fitting the diffusion tensor to data acquired with the scheme specified in <scheme file> using linrecon.

EXAMPLES

Fit the diffusion tensor to the data in SubjectA.Bfloat using linear regression to the log measurements:

$ # Create the DT fitting matrix
$ dtmx -schemefile A.scheme > A_DTMX.Bdouble
$ # Run it over each voxel
$ linrecon SubjectA.Bfloat A.scheme A_DTMX.Bdouble > DiffTensorA.Bdouble

The above is equivalent to:

$ dtfit SubjectA.Bfloat A.scheme > DiffTensorA.Bdouble

AUTHORS

Daniel Alexander <camino@cs.ucl.ac.uk>

BUGS

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Time: 02:07:11 GMT, December 04, 2017

Dtmx