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Related LinksMain.Links HistoryHide minor edits - Show changes to output March 30, 2010, at 05:33 PM
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[[http://www.connectomics.org/viewer | Connectome Viewer]: Software application for the visualization and analysis of structural neuroimaging data. Reads TrackVis fibre format. to:
[[http://www.connectomics.org/viewer | Connectome Viewer]]: Software application for the visualization and analysis of structural neuroimaging data. Reads TrackVis fibre format. March 30, 2010, at 05:33 PM
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[[http://www.nitrc.org/projects/camino-trackvis/ | CAMINO-TRACKVIS]]: Tool for importing Camino streamlines into the TrackVis program. to:
[[http://www.nitrc.org/projects/camino-trackvis/ | CAMINO-TRACKVIS]]: Tool for importing Camino streamlines into the TrackVis program.\\ [[http://www.connectomics.org/viewer | Connectome Viewer]: Software application for the visualization and analysis of structural neuroimaging data. Reads TrackVis fibre format. March 30, 2010, at 04:13 PM
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[[http://www.itksnap.org/pmwiki/pmwiki.php?n=Convert3D.Convert3D | Convert3D]] A command line image manipulation tool from Paul Yushkevich, the author of ITK SNAP. The c3d tool offers a reverse-polish stack calculator environment for 3D image operations. [[http://picsl.upenn.edu/ANTS/ | Advanced Normalization Tools]] ANTS is an open-source toolkit for multiple brain mapping tasks. to:
[[http://www.itksnap.org/pmwiki/pmwiki.php?n=Convert3D.Convert3D | Convert3D]]: A command line image manipulation tool from Paul Yushkevich, the author of ITK SNAP. The c3d tool offers a reverse-polish stack calculator environment for 3D image operations. [[http://picsl.upenn.edu/ANTS/ | Advanced Normalization Tools]]: ANTS is an open-source toolkit for multiple brain mapping tasks. March 30, 2010, at 04:11 PM
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[[http://paraview.org | Paraview ]]: VTK-based visualization software. to:
[[http://paraview.org | Paraview ]]: VTK-based visualization software. \\ [[http://www.nitrc.org/projects/camino-trackvis/ | CAMINO-TRACKVIS]]: Tool for importing Camino streamlines into the TrackVis program. March 29, 2010, at 05:03 PM
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[[http://picsl.upenn.edu/ANTS/ | Advanced Normalization Tools]] ANTS is an open-source toolkit for multiple brain mapping tasks. March 22, 2010, at 03:12 PM
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[[http://www.itksnap.org/pmwiki/pmwiki.php?n=Convert3D.Convert3D | Convert3D]] A command line image manipulation tool from Paul Yushkevich, the author of ITK SNAP. The c3d tool offers a reverse-polish stack calculator environment for 3D image operations. February 10, 2010, at 12:33 AM
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!! General Utilities to:
!!! General Utilities Changed lines 12-13 from:
!! Visualization to:
!!! Visualization Changed line 18 from:
!! Medical imaging software to:
!!! Medical imaging software February 10, 2010, at 12:33 AM
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!! General Utilities Deleted lines 7-9:
[[http://www.geomview.org/ | Geomview]]: Unix-based 3D viewing program. \\ [[http://www.sph.sc.edu/comd/rorden/mricro.html | MRIcro]]: Medical image viewer which can display Analyze [SPM], DICOM, Elscint, Genesis, Magnetom, Somatom, VFF and NEMA format images. Available for Windows, Linux and Solaris. \\ [[http://www.itksnap.org | ITK SNAP]]: Image viewer and segmentation tool, which allows manual and semi-automated definition of regions of interest. Reads and writes several formats, including Analyze. \\ Changed lines 9-25 from:
[[http://tortoisesvn.tigris.org/ | TortoiseSVN]]: A Subversion client, implemented as a windows shell extension. You can use it to download the latest revision of Camino. to:
[[http://tortoisesvn.tigris.org/ | TortoiseSVN]]: A Subversion client, implemented as a windows shell extension. You can use it to download the latest revision of Camino. !! Visualization [[http://www.geomview.org/ | Geomview]]: Unix-based 3D viewing program. \\ [[http://paraview.org | Paraview ]]: VTK-based visualization software. !! Medical imaging software [[http://www.sph.sc.edu/comd/rorden/mricro.html | MRIcro]]: Now deprecated but still handy medical image viewer which can display Analyze [SPM], DICOM, Elscint, Genesis, Magnetom, Somatom, VFF and NEMA format images. Available for Windows, Linux and Solaris. \\ [[http://www.nitrc.org/projects/mricron/ | MRIcron]]: Updated version of MRIcro, includes the @@dcm2nii@@ tool for converting DICOM data to NIfTI format. [[http://www.itksnap.org | ITK SNAP]]: Image viewer and segmentation tool, which allows manual and semi-automated definition of regions of interest. Reads and writes several formats, including NIfTI. Useful for defining multi-label ROIs for Camino tractography. SNAP can also load RGB images like those produced by @@rgbscalarimg@@. \\ November 23, 2009, at 05:15 PM
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(:title Related Links:) July 29, 2009, at 03:00 AM
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[[http://java.sun.com/ | Java]]: You'll need this to run Camino. Available for multiple formats. You need the java SDK, not the JRE. \\ [[http://www.bzip.org/index.html | bzip2]]: Data compressor, available for multiple formats. A Windows-based version is also available [[http://gnuwin32.sourceforge.net/packages/bzip2.htm | here]]. \\ [[http://www.gnu.org/software/tar/tar.html | tar]]: GNU tar homepage. \\ [[http://www.geomview.org/ | Geomview]]: Unix-based 3D viewing program. \\ [[http://www.sph.sc.edu/comd/rorden/mricro.html | MRIcro]]: Medical image viewer which can display Analyze [SPM], DICOM, Elscint, Genesis, Magnetom, Somatom, VFF and NEMA format images. Available for Windows, Linux and Solaris. \\ [[http://www.itksnap.org | ITK SNAP]]: Image viewer and segmentation tool, which allows manual and semi-automated definition of regions of interest. Reads and writes several formats, including Analyze. \\ [[http://www.cygwin.com | Cygwin]]: A UNIX-like shell environment for windows that will allow the use of pipes and redirection making Camino as flexible as possible \\ [[http://tortoisesvn.tigris.org/ | TortoiseSVN]]: A Subversion client, implemented as a windows shell extension. You can use it to download the latest revision of Camino. |