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* [http://www.math.sfu.ca/~cbm/aands/ Abramowitz and Stegun Math Tables] * [http://www.math.sfu.ca/~cbm/aands/ Abramowitz and Stegun Math Tables]
* [http://www.nr.com/ Numerical Recipes] * [http://www.nr.com/ Numerical Recipes]
-Room bookings: [http://www.cs.ucl.ac.uk/cgi-bin/roombooking/ CS]  
-[http://www.ucl.ac.uk/efd/roombooking/ UCL] 
-[https://internal.medphys.ucl.ac.uk/booking/ Med Phys] 
== Ethics == == Ethics ==

Revision as of 10:39, 11 December 2006

This is the UCL Centre for Medical Image Computing (CMIC) wiki. The official CMIC webpage is here.

Contents

The CMIC Group

Administration

For any queries regarding the administration of CMIC please contact Dominique Drai on Ext. 31320 betweeen 09:30 and 13:30. Dominique is located in room 4.13

Requests for a Wiki user name and password should be sent to Ron.

Holiday request form Media:leave-form.pdf

People

People at CMIC. Please enter your phone numbers, email address, room number, and whatever else at this address.

PhD

PhD Pages Information specific to CMIC PhD students.

Seminars

Information on seminars at CMIC.

  • ImPr Pages Informal seminars on image processing.
  • JournalClub Information on the new CMIC Journal Club - Coming soon.


Software

Information on software used, (or which could be used) at CMIC.

  • vtkCmic Mark and David's classes for registration etc.
  • Fluid Registration Details about Bill Crum's fluid implementation and related tools.
  • Matlab Numerical linear algebra software, with toolboxes for image processing, stats, optimisation, etc.
  • VTK C++ visualisation classes (some sort of interface to OpenGL).
  • Insight Toolkit (ITK) C++ imaging and image processing, registration, algorithms classes.
  • ITK++ C++ Daniel and Julia's image processing and registration classes
  • TNT C++ templated matrix classes.
  • SPM Matlab toolbox for segmentation, spatial normalisation, and voxel-wise statistical analysis of brain images.
  • FSL Similar toolbox/library written in C/C++. Popular tools include FLIRT, BET, and FAST.
  • Plus see the list at Structural-Neuro#Useful_Neuro_Software.
  • Image File Formats Software available to read and manipulate image file formats and DICOM images in particular.
  • FAQ
  • Nifti
  • Misc. General (not medical-imaging) tools, e.g. Bibliography software, PDF tools, etc.
  • SSH
  • New CMIC Wiki Discussion on a new CMIC Wiki / web pages

Projects

Pages for specific projects at CMIC.



Science-div

Useful links

Ethics

Undergraduate and MSc Projects

UGprojectDA on Parallel computing for the reconstruction of magnetic resonance images.

Postgraduate

Reading Material

Books

Physics for Diagnostic Radiology. P.P.Dendy B.Heaton, IoP, Paperback. Taylor & Francis Ltd, Bristol, UK, 1999

The Physics of Medical Imaging Webb S. (ed)

Scientific Basis of Medical Imaging Wells P.N.T. (ed) Churchill Livingstone Edinburgh 1982.

MRI background: 'MRI: From Proton to Picture' by McRobbie et al.

On-line

MATLAB tutorials etc from the Mathworks student centre: http://www.mathworks.com/academia/student_center/

Journal and Review Articles

Special issue on parallel imaging of NMR in Biomedicine Volume 19, Issue 3, Pages 287-408 (May 2006) see http://www3.interscience.wiley.com/cgi-bin/jissue/112607009

Please see documentation on customizing the interface and the User's Guide for usage and configuration help.

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