scanner2voxel - Converts scanner-order data to voxel-order data.
SYNOPSIS
scanner2voxel
-voxels <number of voxels> -components <measurements per voxel> [options]
DESCRIPTION
Converts scanner order data files into the voxel order required by the Camino toolkit.
Scanner-order data-files store the whole volume of the first measurement followed by the
whole volume of the second measurement followed by the whole volume of subsequent
measurements. Analyze format diffusion MRI data files are commonly in scanner order.
Voxel-order data files store all of the measurements for the first voxel followed by all
the measurements for the second voxel followed by all measurements for subsequent voxels.
By default, the input and output data type is big-endian float.
This program deals with raw data only. If endian conversion is required, use shredder. If
the data has a header, use image2voxel - which will take care of input endian / type conversion
as needed.
EXAMPLES
Convert scanner order data file ScannerOrder.img, for which the measurement volume has
size 128x128x60 and the acquisition scheme acquires 6 measurements with b=0 and 54
diffusion-weighted measurements, to voxel order: